• new: can parse biom files |
• support for lagged similarity computation in time series |
• automatic assignment of higher-level taxa from lineages |
• large choice of correlation, distance and similarity measures |
• measures can be combined in multiple ways |
• implements the ReBoot procedure (published in PLoS Comp Bio),
which is also available through ccrepe
|
• significance can be tested with various randomization routines and multiple testing corrections |
• supports row groups and combination of 2 input matrices |
• several data preprocessing and filtering options |
• repeatable data analysis with settings loading and saving |
• command line tool for the analysis of large data sets |